PyTorch 常用代码段整理

it2022-05-05  100

基础配置

检查 PyTorch 版本

torch.__version__               # PyTorch version torch.version.cuda              # Corresponding CUDA version torch.backends.cudnn.version()  # Corresponding cuDNN version torch.cuda.get_device_name(0)   # GPU type

 

更新 PyTorch

PyTorch 将被安装在 anaconda3/lib/python3.7/site-packages/torch/目录下。

conda update pytorch torchvision -c pytorch

 

固定随机种子

torch.manual_seed(0) torch.cuda.manual_seed_all(0)

 

指定程序运行在特定 GPU 卡上

在命令行指定环境变量

CUDA_VISIBLE_DEVICES=0,1 python train.py

或在代码中指定

os.environ['CUDA_VISIBLE_DEVICES'] = '0,1'

判断是否有 CUDA 支持

torch.cuda.is_available()

 

设置为 cuDNN benchmark 模式

Benchmark 模式会提升计算速度,但是由于计算中有随机性,每次网络前馈结果略有差异。

torch.backends.cudnn.benchmark = True

如果想要避免这种结果波动,设置

torch.backends.cudnn.deterministic = True

清除 GPU 存储

有时 Control-C 中止运行后 GPU 存储没有及时释放,需要手动清空。在 PyTorch 内部可以

torch.cuda.empty_cache()

或在命令行可以先使用 ps 找到程序的 PID,再使用 kill 结束该进程

ps aux | grep pythonkill -9 [pid]

或者直接重置没有被清空的 GPU

nvidia-smi --gpu-reset -i [gpu_id]

张量处理

 

张量基本信息

tensor.type()   # Data type tensor.size()   # Shape of the tensor. It is a subclass of Python tuple tensor.dim()    # Number of dimensions.

数据类型转换

# Set default tensor type. Float in PyTorch is much faster than double. torch.set_default_tensor_type(torch.FloatTensor) # Type convertions. tensor = tensor.cuda() tensor = tensor.cpu() tensor = tensor.float() tensor = tensor.long()

torch.Tensor 与 np.ndarray 转换

# torch.Tensor -> np.ndarray. ndarray = tensor.cpu().numpy() # np.ndarray -> torch.Tensor. tensor = torch.from_numpy(ndarray).float() tensor = torch.from_numpy(ndarray.copy()).float()  # If ndarray has negative stride

 

torch.Tensor 与 PIL.Image 转换

PyTorch 中的张量默认采用 N×D×H×W 的顺序,并且数据范围在 [0, 1],需要进行转置和规范化。

# torch.Tensor -> PIL.Image. image = PIL.Image.fromarray(torch.clamp(tensor * 255, min=0, max=255     ).byte().permute(1, 2, 0).cpu().numpy()) image = torchvision.transforms.functional.to_pil_image(tensor)  # Equivalently way # PIL.Image -> torch.Tensor. tensor = torch.from_numpy(np.asarray(PIL.Image.open(path))     ).permute(2, 0, 1).float() / 255 tensor = torchvision.transforms.functional.to_tensor(PIL.Image.open(path))  # Equivalently way

 

np.ndarray 与 PIL.Image 转换

# np.ndarray -> PIL.Image. image = PIL.Image.fromarray(ndarray.astypde(np.uint8)) # PIL.Image -> np.ndarray. ndarray = np.asarray(PIL.Image.open(path))

 

从只包含一个元素的张量中提取值

这在训练时统计 loss 的变化过程中特别有用。否则这将累积计算图,使 GPU 存储占用量越来越大。

value = tensor.item()

张量形变

张量形变常常需要用于将卷积层特征输入全连接层的情形。相比 torch.view,torch.reshape 可以自动处理输入张量不连续的情况。

tensor = torch.reshape(tensor, shape)

打乱顺序

tensor = tensor[torch.randperm(tensor.size(0))]  # Shuffle the first dimension

水平翻转

PyTorch 不支持 tensor[::-1] 这样的负步长操作,水平翻转可以用张量索引实现。

# Assume tensor has shape N*D*H*W.tensor = tensor[:, :, :, torch.arange(tensor.size(3) - 1, -1, -1).long()]

复制张量

有三种复制的方式,对应不同的需求。

# Operation                 |  New/Shared memory | Still in computation graph | tensor.clone()            # |        New         |          Yes               | tensor.detach()           # |      Shared        |          No                | tensor.detach.clone()()   # |        New         |          No                |

拼接张量

注意 torch.cat 和 torch.stack 的区别在于 torch.cat 沿着给定的维度拼接,而 torch.stack 会新增一维。例如当参数是 3 个 10×5 的张量,torch.cat 的结果是 30×5 的张量,而 torch.stack 的结果是 3×10×5 的张量。

tensor = torch.cat(list_of_tensors, dim=0) tensor = torch.stack(list_of_tensors, dim=0)

将整数标记转换成独热(one-hot)编码

PyTorch 中的标记默认从 0 开始。

N = tensor.size(0) one_hot = torch.zeros(N, num_classes).long() one_hot.scatter_(dim=1, index=torch.unsqueeze(tensor, dim=1), src=torch.ones(N, num_classes).long())

得到非零/零元素

torch.nonzero(tensor)               # Index of non-zero elements torch.nonzero(tensor == 0)          # Index of zero elements torch.nonzero(tensor).size(0)       # Number of non-zero elements torch.nonzero(tensor == 0).size(0)  # Number of zero elements

张量扩展

# Expand tensor of shape 64*512 to shape 64*512*7*7. torch.reshape(tensor, (64, 512, 1, 1)).expand(64, 512, 7, 7)

矩阵乘法

# Matrix multiplication: (m*n) * (n*p) -> (m*p). result = torch.mm(tensor1, tensor2) # Batch matrix multiplication: (b*m*n) * (b*n*p) -> (b*m*p). result = torch.bmm(tensor1, tensor2) # Element-wise multiplication. result = tensor1 * tensor2

计算两组数据之间的两两欧式距离

# X1 is of shape m*d. X1 = torch.unsqueeze(X1, dim=1).expand(m, n, d) # X2 is of shape n*d. X2 = torch.unsqueeze(X2, dim=0).expand(m, n, d) # dist is of shape m*n, where dist[i][j] = sqrt(|X1[i, :] - X[j, :]|^2) dist = torch.sqrt(torch.sum((X1 - X2) ** 2, dim=2))

 

模型定义

 

卷积层

最常用的卷积层配置是

conv = torch.nn.Conv2d(in_channels, out_channels, kernel_size=3, stride=1, padding=1, bias=True)conv = torch.nn.Conv2d(in_channels, out_channels, kernel_size=1, stride=1, padding=0, bias=True)

如果卷积层配置比较复杂,不方便计算输出大小时,可以利用如下可视化工具辅助

链接:https://ezyang.github.io/convolution-visualizer/index.html

0GAP(Global average pooling)层

gap = torch.nn.AdaptiveAvgPool2d(output_size=1)

双线性汇合(bilinear pooling)

X = torch.reshape(N, D, H * W)                        # Assume X has shape N*D*H*W X = torch.bmm(X, torch.transpose(X, 1, 2)) / (H * W)  # Bilinear pooling assert X.size() == (N, D, D) X = torch.reshape(X, (N, D * D)) X = torch.sign(X) * torch.sqrt(torch.abs(X) + 1e-5)   # Signed-sqrt normalization X = torch.nn.functional.normalize(X)                  # L2 normalization

多卡同步 BN(Batch normalization)

当使用 torch.nn.DataParallel 将代码运行在多张 GPU 卡上时,PyTorch 的 BN 层默认操作是各卡上数据独立地计算均值和标准差,同步 BN 使用所有卡上的数据一起计算 BN 层的均值和标准差,缓解了当批量大小(batch size)比较小时对均值和标准差估计不准的情况,是在目标检测等任务中一个有效的提升性能的技巧。

链接:https://github.com/vacancy/Synchronized-BatchNorm-PyTorch

类似 BN 滑动平均

如果要实现类似 BN 滑动平均的操作,在 forward 函数中要使用原地(inplace)操作给滑动平均赋值。

class BN(torch.nn.Module)

    def __init__(self):         ...         self.register_buffer('running_mean', torch.zeros(num_features))     def forward(self, X):         ...         self.running_mean += momentum * (current - self.running_mean)

计算模型整体参数量

num_parameters = sum(torch.numel(parameter) for parameter in model.parameters())

类似 Keras 的 model.summary() 输出模型信息

链接:https://github.com/sksq96/pytorch-summary

模型权值初始化

注意 model.modules() 和 model.children() 的区别:model.modules() 会迭代地遍历模型的所有子层,而 model.children() 只会遍历模型下的一层。

# Common practise for initialization. for layer in model.modules():     if isinstance(layer, torch.nn.Conv2d):         torch.nn.init.kaiming_normal_(layer.weight, mode='fan_out',                                       nonlinearity='relu')         if layer.bias is not None:             torch.nn.init.constant_(layer.bias, val=0.0)     elif isinstance(layer, torch.nn.BatchNorm2d):         torch.nn.init.constant_(layer.weight, val=1.0)         torch.nn.init.constant_(layer.bias, val=0.0)     elif isinstance(layer, torch.nn.Linear):         torch.nn.init.xavier_normal_(layer.weight)         if layer.bias is not None:             torch.nn.init.constant_(layer.bias, val=0.0) # Initialization with given tensor. layer.weight = torch.nn.Parameter(tensor)

部分层使用预训练模型

注意如果保存的模型是 torch.nn.DataParallel,则当前的模型也需要是

model.load_state_dict(torch.load('model,pth'), strict=False)

将在 GPU 保存的模型加载到 CPU

model.load_state_dict(torch.load('model,pth', map_location='cpu'))

 

数据准备、特征提取与微调

 

得到视频数据基本信息

import cv2 video = cv2.VideoCapture(mp4_path) height = int(video.get(cv2.CAP_PROP_FRAME_HEIGHT)) width = int(video.get(cv2.CAP_PROP_FRAME_WIDTH)) num_frames = int(video.get(cv2.CAP_PROP_FRAME_COUNT)) fps = int(video.get(cv2.CAP_PROP_FPS)) video.release()

TSN 每段(segment)采样一帧视频

K = self._num_segments if is_train:     if num_frames > K:         # Random index for each segment.         frame_indices = torch.randint(             high=num_frames // K, size=(K,), dtype=torch.long)         frame_indices += num_frames // K * torch.arange(K)     else:         frame_indices = torch.randint(             high=num_frames, size=(K - num_frames,), dtype=torch.long)         frame_indices = torch.sort(torch.cat((             torch.arange(num_frames), frame_indices)))[0] else:     if num_frames > K:         # Middle index for each segment.         frame_indices = num_frames / K // 2         frame_indices += num_frames // K * torch.arange(K)     else:         frame_indices = torch.sort(torch.cat((                                          torch.arange(num_frames), torch.arange(K - num_frames))))[0] assert frame_indices.size() == (K,) return [frame_indices[i] for i in range(K)] 

提取 ImageNet 预训练模型某层的卷积特征

# VGG-16 relu5-3 feature. model = torchvision.models.vgg16(pretrained=True).features[:-1] # VGG-16 pool5 feature. model = torchvision.models.vgg16(pretrained=True).features # VGG-16 fc7 feature. model = torchvision.models.vgg16(pretrained=True) model.classifier = torch.nn.Sequential(*list(model.classifier.children())[:-3]) # ResNet GAP feature. model = torchvision.models.resnet18(pretrained=True) model = torch.nn.Sequential(collections.OrderedDict(     list(model.named_children())[:-1])) with torch.no_grad():     model.eval()     conv_representation = model(image)

提取 ImageNet 预训练模型多层的卷积特征

class FeatureExtractor(torch.nn.Module):     """Helper class to extract several convolution features from the given     pre-trained model.     Attributes:         _model, torch.nn.Module.         _layers_to_extract, list<str> or set<str>     Example:         >>> model = torchvision.models.resnet152(pretrained=True)         >>> model = torch.nn.Sequential(collections.OrderedDict(                 list(model.named_children())[:-1]))         >>> conv_representation = FeatureExtractor(                 pretrained_model=model,                 layers_to_extract={'layer1', 'layer2', 'layer3', 'layer4'})(image)     """     def __init__(self, pretrained_model, layers_to_extract):         torch.nn.Module.__init__(self)         self._model = pretrained_model         self._model.eval()         self._layers_to_extract = set(layers_to_extract)     def forward(self, x):         with torch.no_grad():             conv_representation = []             for name, layer in self._model.named_children():                 x = layer(x)                 if name in self._layers_to_extract:                     conv_representation.append(x)             return conv_representation

 

其他预训练模型

链接:https://github.com/Cadene/pretrained-models.pytorch

微调全连接层

model = torchvision.models.resnet18(pretrained=True) for param in model.parameters():     param.requires_grad = False model.fc = nn.Linear(512, 100)  # Replace the last fc layer optimizer = torch.optim.SGD(model.fc.parameters(), lr=1e-2, momentum=0.9, weight_decay=1e-4)

以较大学习率微调全连接层,较小学习率微调卷积层

model = torchvision.models.resnet18(pretrained=True) finetuned_parameters = list(map(id, model.fc.parameters())) conv_parameters = (p for p in model.parameters() if id(p) not in finetuned_parameters) parameters = [{'params': conv_parameters, 'lr': 1e-3},               {'params': model.fc.parameters()}] optimizer = torch.optim.SGD(parameters, lr=1e-2, momentum=0.9, weight_decay=1e-4)

模型训练

 

常用训练和验证数据预处理

其中 ToTensor 操作会将 PIL.Image 或形状为 H×W×D,数值范围为 [0, 255] 的 np.ndarray 转换为形状为 D×H×W,数值范围为 [0.0, 1.0] 的 torch.Tensor。

train_transform = torchvision.transforms.Compose([     torchvision.transforms.RandomResizedCrop(size=224,                                              scale=(0.08, 1.0)),     torchvision.transforms.RandomHorizontalFlip(),     torchvision.transforms.ToTensor(),     torchvision.transforms.Normalize(mean=(0.485, 0.456, 0.406),                                      std=(0.229, 0.224, 0.225)),  ])  val_transform = torchvision.transforms.Compose([     torchvision.transforms.Resize(224),     torchvision.transforms.CenterCrop(224),     torchvision.transforms.ToTensor(),     torchvision.transforms.Normalize(mean=(0.485, 0.456, 0.406),                                      std=(0.229, 0.224, 0.225)), ])

训练基本代码框架

for t in epoch(80):     for images, labels in tqdm.tqdm(train_loader, desc='Epoch =' % (t + 1)):         images, labels = images.cuda(), labels.cuda()         scores = model(images)         loss = loss_function(scores, labels)         optimizer.zero_grad()         loss.backward()         optimizer.step()

标记平滑(label smoothing)

for images, labels in train_loader:     images, labels = images.cuda(), labels.cuda()     N = labels.size(0)     # C is the number of classes.     smoothed_labels = torch.full(size=(N, C), fill_value=0.1 / (C - 1)).cuda()     smoothed_labels.scatter_(dim=1, index=torch.unsqueeze(labels, dim=1), value=0.9)     score = model(images)     log_prob = torch.nn.functional.log_softmax(score, dim=1)     loss = -torch.sum(log_prob * smoothed_labels) / N     optimizer.zero_grad()     loss.backward()     optimizer.step()

Mixup

beta_distribution = torch.distributions.beta.Beta(alpha, alpha) for images, labels in train_loader:     images, labels = images.cuda(), labels.cuda()     # Mixup images.     lambda_ = beta_distribution.sample([]).item()     index = torch.randperm(images.size(0)).cuda()     mixed_images = lambda_ * images + (1 - lambda_) * images[index, :]     # Mixup loss.        scores = model(mixed_images)     loss = (lambda_ * loss_function(scores, labels)             + (1 - lambda_) * loss_function(scores, labels[index]))     optimizer.zero_grad()     loss.backward()     optimizer.step()

L1 正则化

l1_regularization = torch.nn.L1Loss(reduction='sum') loss = ...  # Standard cross-entropy loss for param in model.parameters():     loss += torch.sum(torch.abs(param)) loss.backward()

不对偏置项进行 L2 正则化/权值衰减(weight decay)

bias_list = (param for name, param in model.named_parameters() if name[-4:] == 'bias') others_list = (param for name, param in model.named_parameters() if name[-4:] != 'bias') parameters = [{'parameters': bias_list, 'weight_decay': 0},                              {'parameters': others_list}] optimizer = torch.optim.SGD(parameters, lr=1e-2, momentum=0.9, weight_decay=1e-4)

 

梯度裁剪(gradient clipping)

torch.nn.utils.clip_grad_norm_(model.parameters(), max_norm=20)

计算 Softmax 输出的准确率 

score = model(images) prediction = torch.argmax(score, dim=1) num_correct = torch.sum(prediction == labels).item() accuruacy = num_correct / labels.size(0)

可视化模型前馈的计算图

链接:https://github.com/szagoruyko/pytorchviz

可视化学习曲线

有 Facebook 自己开发的 Visdom 和 Tensorboard 两个选择。

https://github.com/facebookresearch/visdom

https://github.com/lanpa/tensorboardX

 

# Example using Visdom. vis = visdom.Visdom(env='Learning curve', use_incoming_socket=False) assert self._visdom.check_connection() self._visdom.close() options = collections.namedtuple('Options', ['loss', 'acc', 'lr'])(     loss={'xlabel': 'Epoch', 'ylabel': 'Loss', 'showlegend': True},     acc={'xlabel': 'Epoch', 'ylabel': 'Accuracy', 'showlegend': True},     lr={'xlabel': 'Epoch', 'ylabel': 'Learning rate', 'showlegend': True}) for t in epoch(80):     tran(...)     val(...)     vis.line(X=torch.Tensor([t + 1]), Y=torch.Tensor([train_loss]),              name='train', win='Loss', update='append', opts=options.loss)     vis.line(X=torch.Tensor([t + 1]), Y=torch.Tensor([val_loss]),              name='val', win='Loss', update='append', opts=options.loss)     vis.line(X=torch.Tensor([t + 1]), Y=torch.Tensor([train_acc]),              name='train', win='Accuracy', update='append', opts=options.acc)     vis.line(X=torch.Tensor([t + 1]), Y=torch.Tensor([val_acc]),              name='val', win='Accuracy', update='append', opts=options.acc)     vis.line(X=torch.Tensor([t + 1]), Y=torch.Tensor([lr]),              win='Learning rate', update='append', opts=options.lr)

 

得到当前学习率

# If there is one global learning rate (which is the common case). lr = next(iter(optimizer.param_groups))['lr'] # If there are multiple learning rates for different layers. all_lr = [] for param_group in optimizer.param_groups:     all_lr.append(param_group['lr'])

 

学习率衰减

# Reduce learning rate when validation accuarcy plateau. scheduler = torch.optim.lr_scheduler.ReduceLROnPlateau(optimizer, mode='max', patience=5, verbose=True) for t in range(0, 80):     train(...); val(...)     scheduler.step(val_acc) # Cosine annealing learning rate. scheduler = torch.optim.lr_scheduler.CosineAnnealingLR(optimizer, T_max=80) # Reduce learning rate by 10 at given epochs. scheduler = torch.optim.lr_scheduler.MultiStepLR(optimizer, milestones=[50, 70], gamma=0.1) for t in range(0, 80):     scheduler.step()        train(...); val(...) # Learning rate warmup by 10 epochs. scheduler = torch.optim.lr_scheduler.LambdaLR(optimizer, lr_lambda=lambda t: t / 10) for t in range(0, 10):     scheduler.step()     train(...); val(...)

 

保存与加载断点

注意为了能够恢复训练,我们需要同时保存模型和优化器的状态,以及当前的训练轮数。

# Save checkpoint. is_best = current_acc > best_acc best_acc = max(best_acc, current_acc) checkpoint = {     'best_acc': best_acc,        'epoch': t + 1,     'model': model.state_dict(),     'optimizer': optimizer.state_dict(), } model_path = os.path.join('model', 'checkpoint.pth.tar') torch.save(checkpoint, model_path) if is_best:     shutil.copy('checkpoint.pth.tar', model_path) # Load checkpoint. if resume:     model_path = os.path.join('model', 'checkpoint.pth.tar')     assert os.path.isfile(model_path)     checkpoint = torch.load(model_path)     best_acc = checkpoint['best_acc']     start_epoch = checkpoint['epoch']     model.load_state_dict(checkpoint['model'])     optimizer.load_state_dict(checkpoint['optimizer'])     print('Load checkpoint at epoch %d.' % start_epoch)

计算准确率、查准率(precision)、查全率(recall)

# data['label'] and data['prediction'] are groundtruth label and prediction # for each image, respectively. accuracy = np.mean(data['label'] == data['prediction']) * 100 # Compute recision and recall for each class. for c in range(len(num_classes)):     tp = np.dot((data['label'] == c).astype(int),                 (data['prediction'] == c).astype(int))     tp_fp = np.sum(data['prediction'] == c)     tp_fn = np.sum(data['label'] == c)     precision = tp / tp_fp * 100     recall = tp / tp_fn * 100

 

PyTorch 其他注意事项

模型定义

建议有参数的层和汇合(pooling)层使用 torch.nn 模块定义,激活函数直接使用 torch.nn.functional。torch.nn 模块和 torch.nn.functional 的区别在于,torch.nn 模块在计算时底层调用了 torch.nn.functional,但 torch.nn 模块包括该层参数,还可以应对训练和测试两种网络状态。使用 torch.nn.functional 时要注意网络状态,如

def forward(self, x):     ...     x = torch.nn.functional.dropout(x, p=0.5, training=self.training)

model(x) 前用 model.train() 和 model.eval() 切换网络状态。不需要计算梯度的代码块用 with torch.no_grad() 包含起来。model.eval() 和 torch.no_grad() 的区别在于,model.eval() 是将网络切换为测试状态,例如 BN 和随机失活(dropout)在训练和测试阶段使用不同的计算方法。torch.no_grad() 是关闭 PyTorch 张量的自动求导机制,以减少存储使用和加速计算,得到的结果无法进行 loss.backward()。torch.nn.CrossEntropyLoss 的输入不需要经过 Softmax。torch.nn.CrossEntropyLoss 等价于 torch.nn.functional.log_softmax + torch.nn.NLLLoss。loss.backward() 前用 optimizer.zero_grad() 清除累积梯度。optimizer.zero_grad() 和 model.zero_grad() 效果一样。

PyTorch 性能与调试

torch.utils.data.DataLoader 中尽量设置 pin_memory=True,对特别小的数据集如 MNIST 设置 pin_memory=False 反而更快一些。num_workers 的设置需要在实验中找到最快的取值。用 del 及时删除不用的中间变量,节约 GPU 存储。使用 inplace 操作可节约 GPU 存储,如

x = torch.nn.functional.relu(x, inplace=True)

减少 CPU 和 GPU 之间的数据传输。例如如果你想知道一个 epoch 中每个 mini-batch 的 loss 和准确率,先将它们累积在 GPU 中等一个 epoch 结束之后一起传输回 CPU 会比每个 mini-batch 都进行一次 GPU 到 CPU 的传输更快。使用半精度浮点数 half() 会有一定的速度提升,具体效率依赖于 GPU 型号。需要小心数值精度过低带来的稳定性问题。时常使用 assert tensor.size() == (N, D, H, W) 作为调试手段,确保张量维度和你设想中一致。除了标记 y 外,尽量少使用一维张量,使用 n*1 的二维张量代替,可以避免一些意想不到的一维张量计算结果。统计代码各部分耗时

with torch.autograd.profiler.profile(enabled=True, use_cuda=False) as profile:     ... print(profile)

或者在命令行运行

python -m torch.utils.bottleneck main.py

 ======================================================

 

C:\WINDOWS\system32>S:\MongoDB\Server\4.0\bin

C:\WINDOWS\system32>S:

 S:\MongoDB\Server\4.0\bin>mongod --dbpath "S:\MongoDB\Server\4.0\data\db" --logpath "S:\MongoDB\Server\4.0\log\mongo.log" --install --serviceName "MongoDB"

2019-06-28T10:43:50.342+0800 I CONTROL  [main] log file "S:\MongoDB\Server\4.0\log\mongo.log" exists; moved to "S:\MongoDB\Server\4.0\log\mongo.log.2019-06-28T02-43-50".

 S:\MongoDB\Server\4.0\bin>net start mongodb

MongoDB Server 服务正在启动 ..

MongoDB Server 服务已经启动成功。

 S:\MongoDB\Server\4.0\bin>

 可视化MongoDB:

PyCharm和Robo 3T 1.3.1对MongoDB可视化

 

转载于:https://www.cnblogs.com/jeshy/p/11166029.html


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